UseGalaxy.eu Tool Updates for 2019-09-14
On 2019-09-14, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #137
Statistics
- keras_batch_models was updated to ed4d31f47d65
- keras_model_builder was updated to 5f39cff2a372
- keras_model_config was updated to 0fd7d8e90e2a
- ml_visualization_ex was updated to f96efab83b65
- model_prediction was updated to af7ed4d45619
- scipy_sparse was updated to eb3091b4ee4b
- sklearn_build_pipeline was updated to 653be9c354ec
- sklearn_clf_metrics was updated to 5a21a631d2eb
- sklearn_data_preprocess was updated to 4952fe39b61d
- sklearn_discriminant_classifier was updated to 8e49f26b14d3
- sklearn_ensemble was updated to 47d4baa183b2
- sklearn_estimator_attributes was updated to 7a64b9f39a46
- sklearn_feature_selection was updated to fe47a06943fb
- sklearn_generalized_linear was updated to a9474cdda506
- sklearn_model_validation was updated to 5895fe0b8bde
- sklearn_nn_classifier was updated to fbc38059bb8f
- sklearn_numeric_clustering was updated to 6edcaa8dbb9f
- sklearn_pairwise_metrics was updated to 20b7295ae6e9
- sklearn_regression_metrics was updated to 203b2ade8097
- sklearn_sample_generator was updated to 52ea044c667f
- sklearn_searchcv was updated to 68753d45815f
- sklearn_svm_classifier was updated to 7d7379dfef8b
- sklearn_train_test_eval was updated to cc49634df38f
Apollo
- apollo_create_account was updated to e80d29fd2a33
- apollo_create_or_update was updated to 496444ad9291
- apollo_delete_features was updated to 3f0f2af50989
- apollo_delete_organism was updated to b67ea77f5fe6
- apollo_export was updated to ad02f02c75e3
- apollo_feat_from_gff3 was updated to 922dd0b252c8
- apollo_fetch_jbrowse was updated to 331a3bde732e
- apollo_iframe was updated to 860ca63f4a59
- apollo_list_organism was updated to 2c749ed310da
Convert Formats
- graphicsmagick_image_convert was updated to 57e2503e6039
- crossmap_bam was updated to 5051467dc96a
- crossmap_bed was updated to e6c68525e9ee
- crossmap_gff was updated to e80720e27001
- crossmap_vcf was updated to 9d61d74f03a4
- crossmap_wig was updated to 3cb69f2ecea2
- gtftobed12 was updated to 57d45064f114
- intermine_galaxy_exchange was updated to c24014d80001
Phylogenetics
- blast_parser was updated to 363f3480622d
- ete was updated to 6a5282f71f82
- gafa was updated to b9f1bcf5ee59
- gstf_preparation was updated to 7e11a7f4bdba
- hcluster_sg was updated to 1d2de27d7a9c
- hcluster_sg_parser was updated to dbc49bd1a3e9
- hyphy_absrel was updated to 5c87e4907e08
- hyphy_bgm was updated to bf97cacc1a55
- hyphy_busted was updated to b678fe748dc5
- hyphy_fade was updated to 6164d9298db9
- hyphy_fel was updated to 6c3ece5fb602
- hyphy_fubar was updated to 0f108ee932ea
- hyphy_gard was updated to 1942d02039c2
- hyphy_meme was updated to 7b3f9c78cf6d
- hyphy_relax was updated to 551616a65f8f
- hyphy_slac was updated to c2bed8cc8fc1
- hyphy_sm19 was updated to ae7c42d49717
- phyml was updated to 850e213bee26
Get Data
- sra_tools was updated to f5ea3ce9b9b0
Annotation
- abricate was updated to f9bf6a8d8547
- busco was updated to 1440ae06552f
- maker was updated to 96ac930d84fa
- progressivemauve was updated to bdb752f3c6bb
- socru was updated to ce0c9fe32e04
Expression Tools
- compose_text_param was updated to feb3acba1e0a
Epigenetics
- moabs was updated to 26d7ec4af119
Graph/Display Data
- jbrowse was updated to 9de82b4963e6
- pathview was updated to bd99e8fbde97
FASTA/FASTQ manipulation
- fasta_compute_length was updated to 2051602a5f97
- seqtk was updated to 58c8ece95b53
- umi_tools_count was updated to 933220bbc2ae
Metabolomics
- msnbase_readmsdata was updated to 86a20118e743
Variant Calling
- snippy was updated to 0aa87d97847f
RNA Analysis
- alevin was updated to 908a8d400fa2
- salmon was updated to 4de6e2e40c7a
- salmonquantmerge was updated to 43658f594542
Collection Operations
- collapse_collections was updated to 49bd84e136c7
Text Manipulation
- table_compute was updated to 02c3e335a695
Single-cell
- scanpy_cluster_reduce_dimension was updated to 0e212e42ef88
- scanpy_filter was updated to 6ea5a05a260a
- scanpy_inspect was updated to 5d2e17328afe
- scanpy_normalize was updated to ed64c90a9b93
- scanpy_plot was updated to 397d2c97af05
- scanpy_remove_confounders was updated to 9ca360dde8e3
- scater_create_qcmetric_ready_sce was updated to 2d455a7e8a3d
- scater_create_qcmetric_ready_sce was updated to fd808de478b1
- scater_filter was updated to b7ea9f09c02f
- scater_normalize was updated to 946179ef029c
- scater_plot_dist_scatter was updated to 2e41b35b5bdd
- scater_plot_exprs_freq was updated to a8290d207005
- scater_plot_pca was updated to 46fc6751d746