UseGalaxy.eu Tool Updates for 2019-07-19
On 2019-07-19, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #123
Mothur
- mothur_count_seqs was updated to ecbd9ed733e6
Phylogenetics
- hcluster_sg_parser was updated to 02d73e6ca869
Quality Control
- fastx_collapser was updated to 421f0af4ee95
Single-cell
- scater_create_qcmetric_ready_sce was updated to 2d455a7e8a3d
- scater_filter was updated to e6ca62ac65c6
- scater_normalize was updated to 87757f7b9974
- scater_plot_dist_scatter was updated to 4887c4c69847
- scater_plot_exprs_freq was updated to a8290d207005
- scater_plot_pca was updated to bea3359ba852
Phenotype Association
- ctd_batch was updated to 4a32700dcaa2
- divide_pg_snp was updated to f74fdfc17143
- hgv_fundo was updated to ca3fcd18dc3e
- hgv_hilbertvis was updated to e1a9ad05dced
- snpfreq was updated to 5c3ac057608b
- vcf2pgsnp was updated to 5fca46616675
Imaging
- 2d_feature_extraction was updated to 6fdb3542a406
- 2d_filter_segmentation_by_features was updated to e576b73a2e2f
- 2d_local_threshold was updated to a20c14eb5f98
- 2d_split_binaryimage_by_watershed was updated to 5e21d7342593
- anisotropic_diffusion was updated to 17d3cfba9b5a
- binary2labelimage was updated to 6c92ac9ce868
- colocalization_viz was updated to fc85eb253163
- color_deconvolution was updated to 0976b373a321
- concat_channels was updated to d42501109c05
- detection_viz was updated to ec1ca4d62192
- image_info was updated to 8c25d4ff0b51
- labelimage2points was updated to 07525a7d9ea0
- mergeneighboursinlabelimage was updated to c6a6ab7c9940
- permutate_axis was updated to 5b82f2186244
- points2labelimage was updated to 9bd039f46843
- scale_image was updated to f3c05a734dd1
Convert Formats
- idconvert was updated to edb33e8224c6
Proteomics
- protease_prediction was updated to c7a363d7ab26
- decoyfasta was updated to c15d72720643
- eggnog_mapper was updated to a37df6f6b869
- hardklor was updated to 539f157784e7
- morpheus was updated to e0104a9f20f0
- peptideshaker was updated to 78fad25eff17
Peak Calling
- diffbind was updated to 69138bfd8644
- ccat was updated to 201d8e7dfc43
- macs was updated to f6319b0b4391
- sicer was updated to 4a14714649b4
- macs2 was updated to 6d4babad010f
- macs2 was updated to bfe57d6e0c4c
- piranha was updated to f7f366ede872
Test Tools
- hifive was updated to 4a978cf8cf92
Graph/Display Data
- jbrowse was updated to 6b774e9d6387
SAM Tools
- bamtools_filter was updated to bd735cae4ce6
Picard
- picard was updated to ab1f60c26526
ChemicalToolBox
- autodock_vina was updated to 65ffed035ca8
- autodock_vina_prepare_ligand was updated to 965badb456d4
- autodock_vina_prepare_receptor was updated to d15e5a2a7558
- chemfp was updated to 43a9e7d9b24f
- chemical_data_sources was updated to c2055dd1927b
- confab was updated to 039ef13e3676
- ctb_machine_learning was updated to fe542273784f
- natural_product_likeness was updated to b2cad51889ea
- openbabel was updated to 125da3a296ca
- openbabel was updated to b52872a1755a
- openmg was updated to 8d2b075966d6
- opsin was updated to cda22c799d0a
- osra was updated to 0916781bc971
- rdkit was updated to 6bb56f3a8de0
- silicos_it was updated to 5f1d98674a21
- simsearch was updated to 52e5c0f2907f
Imaging
- 2d_simple_filter was updated to dba87c4b32d3