Latest version of MultiQC

October 25, 2017

MultiQC is a tool that aggregate results from bioinformatics analyses across many samples into a single report. It is really a great and useful tool!

{% twitter https://twitter.com/bebatut/status/922774572923006977 %}

A first integration of this tools into Galaxy was available thanks to Yvan Le Bras and EnginesOn. However, since this first version of MultiQC support for more tools was added.

We then worked on a new updated version to support the more modules, integrate more tests and move it under the Intergalactic Utilities Commission (IUC) umbrella.

MultiQC in Galaxy now supports reports from:

Bamtools
Bcftools
Bismark
Bowtie 2
BUSCO
Cutadapt/Trim Galore!
FastQC
featureCounts
Flexbar
GATK (BaseRecalibrator or VariantEval output)
HISAT2
HTSeq
Kallisto
Picard
Prokka
QUAST
RSeQC (bam_stat, gene_body_coverage, infer_experiment, ...)
Samblaster
Samtools
SortMeRNA
STAR
TopHat2
Trimmomatic
VCFTools

Try it now!