Galaxy Screencasts and Demos

Screencasts are one of several ways to learn how to use Galaxy. These video tutorials cover many aspects of Galaxy, from simple tasks like uploading data, to complex analysis.

Browse the screencasts at http://vimeo.com/galaxyproject.

Getting Started

Using Galaxy

Accounts on Main
registration, openIDs		 Datasets 1 and Datasets 2 (pending)
icons, functions,
content, metadata,
basic workflows 		Share or Publish
histories, workflows,
visualizations, pages,
publication support
Get Data: Upload File
browse, url, paste, ftp 		Learning Resources
self-serve help 		Managing Histories
saved histories, disk quotas
Using FTP
step-by-step, wiki 		FASTQ Prep Illumina
jobs, FASTQ Groomer,
edit attributes, FastQC 		Custom Genomes
format, how to load,
read more on wiki...

Analysis

TAF1: Which genes' promoter regions contain these sites?
Metagenomics 1 and Metagenomics 2
Bushman Data Access and Bushman Data Analysis
SOLiD Single End and SOLiD Mate Pair
Mapping Against Custom Genome
Illumina Single Ends and Illumina Paired Ends
454 Mapping Single End
DNase I hypersensitive sites
Using PhyloTastic Tools inside Galaxy by Rutger Vos, created 2012-06-11
CPB-2012:
prot1 Finding Human Coding Exons with Highest SNP Density
prot2 Loading Data and Understanding Datatypes
prot3 Calling Peaks for ChIP-seq Data
prot5 Working with Multiple Sequence Alignments

Tutorials

Interval Operations tutorial

Also see Learn/Interval Operations.

Developers How To

Archives