Galaxy is an open-source platform for FAIR data analysis that enables users to:

use tools from various domains (that can be plugged into workflows) through its graphical web interface.
run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
manage data by sharing and publishing results, workflows, and visualizations.
ensure reproducibility by capturing the necessary information to repeat and understand data analyses.

The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.

The French Galaxy server

The French Galaxy server UseGalaxy.fr is maintained by IFB NNCR Cluster Task force. Please check our Terms of Use and data retention policy before using the server. We offer thousands of tools, increased quota on temporary basis, and compute infrastructure for trainers through Training Infrastructure as a Service (TIaaS).

The following regional platforms, members of IFB, are involved in the maintenance and development of UseGalaxy.fr:

GenOuest, in Rennes
ABiMS, in Roscoff

Contact

Ask for help, tools, or temporary increase of quota on our support forum

Contact support

Training

If you are organising a training session, you can book computing resources using the TIaaS system

TIaaS request

GalaxyCat

Can't find a tool on usegalaxy.fr? Why not search on the IFB Galaxy Catalog ?

Browse GalaxyCat

Citation

Have you used the French Galaxy server for your data analysis?

Cite the server

Team

The French Galaxy team is distributed across different cities in France.

Meet the team

Communities: domain-centric Galaxy subdomains

Workflow4Metabolomics

Data processing, analysis and annotation for the metabolomics community

Workflow4Metabolomics

ProteoRE

Functional analysis and exploration of proteomics and transcriptomics data in biomedical research

ProteoRE

Covid19

Variant analysis, consensus using communuty approuved workflows and datasets

Covid19

Metabarcoding

With the following tools and pipelines : FROGS, Qiime, Mothur, Obitools, DADA2, PICRUSt

Metabarcoding

Met4J

Open-source Java library dedicated to the structural analysis of metabolic networks

Met4j

MNHN

Tools from the French Muséum National d'Histoire Naturelle

MNHN

News

ELIXIR Funding for FAIRyMAGs: Optimising Metagenomics Assembled Genomes building

FAIRyMAGs: Optimising Metagenomics Assembled Genomes building: workflow finalisation, training material development, real data evaluation and resource allocation tool creation

Unlocking Microbial Data Analysis: The microGalaxy Preprint Is Here!

🚀 2024: A SPOC-tacular Year in Review 🌌

As we orbit the end of another stellar year, let’s engage warp drive and reflect on the out-of-this-world achievements of the Single-cell & sPatial Omics Community (SPOC 🖖). From launching new tools to charting new tutorials, SPOC’s journey through the Galaxy (platform) has been nothing short of cosmic! 🌠

Galaxy Newsletter: December 2024

From groundbreaking milestones to exciting new features, join us in celebrating Galaxy’s incredible journey through 2024! Plus, get a sneak peek at what Galaxy has in store for 2025.

Biological Data Science 2024

Galaxy had a strong presence at Biological Data Science 2024, featured in talks and posters that showcased its power and versatility in advancing biological research.