Analysis of biological data with Galaxy
Learn how to use Galaxy in YOUR research
Penn State Galaxy Workshop 2022
Free registration is required for this workshop. This will allow us to prepare well and make it as effective as possible. Please use [this form] to register.
This workshop is for you if:
- You generate any types of sequence data (Sanger, Illumina, Oxford Nanopore, Pacific Biosciences)
- Use sequence data to perform any types of analyses (variation detection, Genome Assembly, ChIP-seq, RNAseq [including single cell], Metagenomics, etc...)
- Work with proteomic, metabolomics, or imaging data
- Work in computational chemistry
The workshop will be divided in six parts. The first five cover analysis of data from the standpoint of researchers who generate and analyze the data. The last part is aimed at developers who want to integrate their tools into Galaxy or develop automated analyses utilizing Galaxy workflows and infrastructure.
All workshops will begin promptly at 2 pm (14:00)!
| When? | What? |
|---|---|
| October 31 | What is it good for: Overview of the system, what it can do, first analysis |
| November 7 | History and data upload: Getting data from one dataset to 100,000 samples |
| December 5 | Galaxy workflows: Automating analyses and constructing complex pipelines |
| December 12 | Galaxy tool ecosystem: What can you do with > 4,000 tools |
| December 19 | Galaxy for developers: Adding tools and using API |
Location: Wartik 501
Food
This is an in person workshop. We will provide snacks. In order to know how much food to order we ask you to register here.
This workshop is sponsored by the Huck Institutes of the Life Sciences at Penn State.