On the 23rd and 24th March 2020, the AG Schilling and AG Hecht will give a proteomics and RNA-seq data analysis course in Freiburg. The course is tailored towards molecular medicine master students but every interested student or researcher is welcome to register until all places are filled.

The hands on course will cover a basic Galaxy introduction, proteomics data analysis (for label-free data) and RNA-seq data analysis. The course is free of charge.

Trainers:

• Janna Wenzel (Institute of Molecular Medicine and Cell Research, Freiburg)
• Matthias Fahrner (Institute of Surgical Pathology, Freiburg)
• Melanie Föll (Institute of Surgical Pathology, Freiburg)

Venue

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Important notes

1. If you are registered but cannot attend our workshop, please contact us by email immediately. We have a long waiting list and can give your place to others, even on short notice.
2. Please register at https://usegalaxy.eu if you have not done so already. For the MPI people: the European Galaxy server is different from the Galaxy server of MPI: you will need an account on our server, too.
3. You can bring your own notebook or computers will be available. Eduroam is available, ask your institute for how to login.
4. The workshop is free of charge. Unfortunately no stipends for travel or accommodation are available.

Program:

If the times will change, it will be announced during the workshop.

Day | Start | End | Topics | Material --------- | ----- | ---- | ---------------------------------------------------------------------- | ------------- Monday | 09:00 | 17:00 | Galaxy presentations and introduction, Proteomics | tutorial, tutorial Tuesday | 09:00 | 17:00 | RNA-seq analysis | tutorial, slides {:.table.table-striped}

Lunch Options

Preparation

You must go through two Galaxy interactive tours before beginning the training. These interactive tours guide you stepwise through the Galaxy user interface and the history. They will help you to follow the Galaxy introduction, and ensure everyone has a basic understanding of how Galaxy works.

• Galaxy UI
• History Introduction

If you have any questions, please do not hesitate to contact us

Travel Options

From Basel airport to Freiburg you have two options:

1. Take the train to Freiburg Hauptbahnhof (ICE or EC takes 30 min; Regio 60 min)
2. Take the airport shuttle bus to Freiburg Hauptbahnhof (Timetable)

From Freiburg Hauptbahnhof to Venue you should use local public transport (VAG):

• Tram line map
• Tram line: 2
• Tram stop: "Hauptstraße"

You are looking for building 1 (Institute of Biology II/III) on the university map

Accomodations

Some suggestions for hotels (please check portals such as HRS, booking, etc.)

Hotel | Location | Website --------------------------------------------- | ------------------ | ---------- Hotel am Rathaus | Rathausgasse 4-8 | Website Hotel Barbara | Poststrasse 4 | Website Intercity Hotel Freiburg | Bismarckallee 3 | Website Stadthotel Freiburg Kolping Hotel & Gästehaus | Karlstr.7 | Website Ibis Freiburg Süd (bit more far away) | Bötzinger Str.76 | Website StayInn Hostel und Gästehaus | Stühlinger Str.24a | Website {:.table.table-striped}

Note: In Freiburg you sometimes have to pay an additional accommodation tax. For business trips this tax does not to be paid if your employer fills out this form. You will need to show this form to the hotel. {:.alert.alert-warning}

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