Galaxy is a user-friendly open-source web platform designed to facilitate accessible, reproducible, and transparent computational research. It provides access to a vast collection of free-to-use, well-documented and maintained tools.

Galaxy Italy provides Elixir Italy users and beyond compute and storage resources for running several tools in different research domains. For more information, issues and suggestions please contact us by mail.

The Italian Galaxy server

The Italian Galaxy server UseGalaxy.it is maintained primarily by ELIXIR-ITALY, in collaboration with many academic groups across Italy. Please check our Terms of Use before using the server.

The following Institutions are actively providing resource to usegalaxy.it: CNR, INFN, University of Bari, Consortium GARR, CINECA and University of Milan.

Contact

Ask for help, tools, or temporary increase of quota on our support forum

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Laniakea

Need to deploy your own Galaxy instance? Have a look to Laniakea.

Citation

Have you used the Italian Galaxy server or Laniakea for your data analysis?


Elixir Italy

For any questions regarding ELIXIR-Italy initiatives, please contact us.



Our Data Policy

Registered UsersUnregistered UsersGDPR Compliance
User data on UseGalaxy.it (i.e. datasets, histories) will be available as long as they are not deleted by the user. Once marked as deleted the datasets will be permanently removed within 14 days. If the user "purges" the dataset in the Galaxy, it will be removed immediately, permanently. In special cases, an extended quota can be requested for a limited time period.. Processed data will only be accessible during one browser session, using a cookie to identify your data. This cookie is not used for any other purposes (e.g. tracking or analytics). If UseGalaxy.it service is not accessed for 90 days, those datasets will be permanently deleted. The Galaxy service complies with the EU General Data Protection Regulation (GDPR). You can read more about this on our Terms and Conditions.

Laniakea@ReCaS

The Laniakea@ReCaS service, based on Laniakea software stack, provides the possibility to automate the creation of Galaxy-based virtualized environments through an easy setup procedure, providing an on-demand workspace ready to be used by life scientists and bioinformaticians. At the end of the configuration process, the user gains access to a private, production-grade, fully customizable, Galaxy virtual instance. Laniakea features the deployment of a stand-alone or cluster-backed Galaxy instances, shared reference data volumes, encrypted data volumes and rapid development of novel Galaxy flavours for specific tasks.

For more information about Laniakea, please subscribe to our mailing list.

Get Access

Laniakea@ReCaS home page

Communities: Laniakea's public servers

Vinyl

VINYL (Variant prIoritizatioN bY survivaL analysis) integrates an innovative method for variant prioritization, along with a highly curated collection of databases and resources for the annotation of human genetic variants.

CorGAT

CorGAT, the Coronavirus Genome Analysis Tool, is a novel, highly effective and user-friendly approach for the functional annotation of SARS-CoV-2 genomes based on Galaxy.

ITSoneWB

ITSoneWB (ITSone WorkBench) collects and integrates the high-quality ITS1 reference collection in ITSoneDB with DNA metabarcoding well-established analysis pipelines and new tools in an easy-to-use service addressing the eukaryotic domain of life.

PIPE-T

PIPE-T is the first Galaxy tool for parsing, filtering, normalising, imputing, and analysing RT-qPCR data. PIPE-T integrates the functionalities implemented in various R packages, such as HTqPCR, impute, and RankProd, in a simple, transparent, accessible, reproducible, and user-friendly environment.

News

SPOC HDR UK ELIXIR-UK CoFest 2025: How did it go?

We held our second 🖖🏾SPOC CoFest, in the great tradition of the excellent CoFests organised in the GTN that welcomed @gtn:nomadscientist and many others into the community.

We are striking!

usegalaxy.eu closes job-queue on February 14th to support climate strike

CellxGene-VIP scRNA-seq, spatial transcriptomics, and multiome data visualization

CELLxGENE-VIP is a frontend plugin of CELLxGENE, enabling users to generate multiple QC plots in high-resolution SVG or PNG format. It can also visualize spatial transcriptomics and 10X multiome.

TabPFN: Foundation Model for Tabular Data in Galaxy

Fast machine learning method for making predictions on any tabular data

Events

Feb 27Research Data Management with RSpace and Galaxy - Talk and Q&A

Discover how RSpace's open-source solutions promote innovation and collaboration in research data management (RDM).

Mar 6 - Mar 7Awareness in Data Management and Analysis for Industry and Research

Join the #BioNT workshop on Data Management and Analysis for Industry and Research

Mar 10 - Mar 14Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.